Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015927546.1_cds_XP_016475309.1_67257
CDS Infomation

[gene=LOC107796993] [db_xref=GeneID:107796993] [protein=splicing factor 3A subunit 3-like] [protein_id=XP_016475309.1] [location=complement(join(15988..16134,19192..19338,20029..20157,20920..20997,21227..21385,21539..21610,24355..24519,25142..25238,25510..25652,26389..26496,26594..26707,26793..26966))] [gbkey=CDS]
Sequence

ATGTCGTCGACTCTACTGGAGGTGACTCGTGCATCGCACGAGGAAGTTGAGCGGCTCGAG
CGTCTCGTCGTCAAGGATCTCCAGACCGAGCCGGCTACTAACAAGGACCGGCTCCACCAG
AGCCACCGCGTTCGTAACATGATCGAGCAAATCATTGACACTACACATAAACTGGTAGAT
ATCTATGAAGACAAAGACGGTGCGAGGAAGGATGAAATTGCAGCTCTTGGAGGCCAGACA
GCAACTGGAACAAACATATTTAGTGCGTTTTATGACAGATTAAAAGAGATTCGGGAATAC
CATAGAAGGCATCCTGCTGCGCGTGTTGTTATTGATGCCAGCGATGATTACGAGCAGCTC
CTCAAAGAAGAACCACAAATCGAGTTTAGTGGCGAGGAAGGTTCAGGGCGATACCTTGAC
TTGCATGAATTGTTTAACGAGTATTACAACTCCAAATTTGGTGCGCGAATTGAATACACA
GCTTATCTTGATGTATTTTCCCAACCGCAGAAGATTCCCCGTAAAGCAAAGTCGACAAGG
CCATACCGAGAATATTTGCAGAAACTATTGGAGTATCTAATCTATTTTTTCGAGCGGACA
GAGCCCTTGCAGGATCTTGATAGGATATTCTCAAAGGTAACAAGTGAATTCGAAGAAGAG
TGGACTATTGGCAAGGTAGAAGGATGGGAAAATAGCAGTCAGGAAAATGGTAGTGCTCCA
CAGAATCATACTGCGATTGATCTTAATTCTTATAGTACAGTTGAGGAGCTGATGATAGAG
GGACCTGATAAGTTAAAGGAGGCATTGGGTGCTCTAGGATTGAAGACTGGAGGTACTATT
CAGCAACGTGCTGAGAGACTTTTCCTTACGAAGCATACACCGCTAGAAAAACTGGACAAA
AAGCATTTTGCAAAAGGTTCCCGGAAACCAGAACAAAATGGTGTTATGCCAGCTCCTCAA
GTGGGTGATGATGTAAAAGAGATTGCCCTGATGGAAGCAAAGATAAGAAAGCTATGTGAT
CTGTTGGATGAGACAATTGTGCGGACAAAAGAGAATGTTGAGAAAAAACAGGCTTTGACA
TATGAAGAAATGGAGGCAGAACGTGAAGAGGATGATGTACAGGCTGAGTCTGAGAGTGAT
GAAGAAGATCAACAAATTTATAATCCTCTGAAGTTGCCTATGGGTTGGGATGGGAAGCCT
ATTCCTTACTGGCTGTATAAGCTTCACGGCCTTGGTCAGGAGTTCAAGTGTGAGATATGT
GGGAACCATAGTTATTGGGGCCGTAGGGCTTATGAGCGGCATTTCAAGGAATGGAGACAT
CAACATGGGATGCGTTGCCTTGGTATCCCAAATACTAAGAACTTCAATGAGATCACATCA
ATCGAAGAAGCCAAGCAACTTTGGGAAAGAATCCAAGAAAAACAAGGGCTGAATAAGTGG
CGCCCAGATCTTGAAGAAGAATATGAAGATCAAGAGGGCAACATCTACAACAAAAAGACA
TATACGGATCTACAACGCCAGGGATTGATCTAG

Peptide Sequence

PEP ID

XP_016475309.1
PEP Infomation

PREDICTED: splicing factor 3A subunit 3-like [Nicotiana tabacum]
Sequence

MSSTLLEVTRASHEEVERLERLVVKDLQTEPATNKDRLHQSHRVRNMIEQIIDTTHKLVD
IYEDKDGARKDEIAALGGQTATGTNIFSAFYDRLKEIREYHRRHPAARVVIDASDDYEQL
LKEEPQIEFSGEEGSGRYLDLHELFNEYYNSKFGARIEYTAYLDVFSQPQKIPRKAKSTR
PYREYLQKLLEYLIYFFERTEPLQDLDRIFSKVTSEFEEEWTIGKVEGWENSSQENGSAP
QNHTAIDLNSYSTVEELMIEGPDKLKEALGALGLKTGGTIQQRAERLFLTKHTPLEKLDK
KHFAKGSRKPEQNGVMPAPQVGDDVKEIALMEAKIRKLCDLLDETIVRTKENVEKKQALT
YEEMEAEREEDDVQAESESDEEDQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEIC
GNHSYWGRRAYERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKQLWERIQEKQGLNKW
RPDLEEEYEDQEGNIYNKKTYTDLQRQGLI

Transcript Sequence

Gene sequence data has not been registered.